Alberto Mulone

@misc{24:madrid:hipes:talk,

title = {A Fault Tolerance mechanism for Hybrid Scientific Workflows},

author = {Alberto Mulone and Doriana Medić and Marco Aldinucci},

url = {https://datacloud.di.unito.it/index.php/s/9Ddj6fGgmDbLDXj},

year  = {2024},

date = {2024-08-01},

address = {Madrid, Spain},

abstract = {In large distributed systems, failures are a daily event occurring frequently, especially with growing numbers of computation tasks and locations on which they are deployed. The advantage of representing an application as a workflow is possibility to utilize the Workflow Management Systems which are reliable systems guaranteeing the correct execution of the application and providing the features such as portability, scalability, and fault tolerance. Over recent years, the emergence of hybrid workflows has posed new and intriguing challenges by increasing the possibility of distributing computations involving heterogeneous and independent environments. As a consequence, the number of possible points of failure in the execution augmented, creating different important challenges interesting to study.},

howpublished = {1st workshop about High-Performance e-Science (HiPES)},

keywords = {eupex, icsc, streamflow},

pubstate = {published},

tppubtype = {misc}

}

@misc{24:ic:elise:xffl,

title = {Cross-Facility Federated Learning - Part II},

author = {Iacopo Colonnelli and Robert Birke and Giulio Malenza and Gianluca Mittone and Alberto Mulone and Marco Aldinucci},

url = {https://datacloud.di.unito.it/index.php/s/7HonBpcWPxotXLX},

year  = {2024},

date = {2024-06-01},

address = {Helsinki, Finland},

note = {Invited talk},

keywords = {eupex, icsc, space},

pubstate = {published},

tppubtype = {misc}

}

@misc{24:amulone:comete,

title = {Workflows for future High-Performance Computing},

author = {Alberto Mulone},

url = {https://datacloud.di.unito.it/index.php/s/ZGG8fLMp5B7qRHS},

year  = {2024},

date = {2024-04-01},

address = {Torino, Italy},

howpublished = {COMETE PhD Workshop},

keywords = {icsc},

pubstate = {published},

tppubtype = {misc}

}

@misc{24:icsc:spoke1:eni,

title = {Cross-Platform Full Waveform Inversion},

author = {Alberto Mulone},

url = {https://datacloud.di.unito.it/index.php/s/M3HkxA5wsBPS5ro},

year  = {2024},

date = {2024-02-01},

address = {Torino, Italy},

abstract = {Presentation about the Innovation Grant in collaboration with ENI},

howpublished = {ICSC - Spoke 1 meeting},

keywords = {icsc, streamflow},

pubstate = {published},

tppubtype = {misc}

}

@misc{23:eurohpc,

title = {Cross-Facility Federated Learning},

author = {Iacopo Colonnelli and Robert Birke and Giulio Malenza and Gianluca Mittone and Alberto Mulone and Marco Aldinucci and Valerio Basile and Marco Antonio Stranisci and Viviana Patti and Jeroen Galjaard and Lydia Y. Chen and Sanzio Bassini and Massimiliano Guarrasi and Gabriella Scipione and Jan Martinovič and Vit Vondrák},

url = {https://datacloud.di.unito.it/index.php/s/DDAz4QkJP3WZ68M},

year  = {2023},

date = {2023-12-01},

address = {Bruxelles, Belgium},

howpublished = {1st EuroHPC User Day},

keywords = {across, ai, eupex, eupilot, HPC},

pubstate = {published},

tppubtype = {misc}

}

@misc{23:mulone:wide:talk,

title = {Porting the Variant Calling Pipeline for NGS data in cloud-HPC environment},

author = {Alberto Mulone and Sherine Awad and Davide Chiarugi and Marco Aldinucci},

url = {https://datacloud.di.unito.it/index.php/s/zNLj3LCZNsNxHwy},

year  = {2023},

date = {2023-06-01},

address = {Torino, Italy},

abstract = {In recent years we have understood the importance of analyzing and sequencing human genetic variation. A relevant aspect that emerged from the Covid-19 pandemic was the need to obtain results very quickly; this involved using High-Performance Computing (HPC) environments to execute the Next Generation Sequencing (NGS) pipeline. However, HPC is not always the most suitable environment for the entire execution of a pipeline, especially when it involves many heterogeneous tools. The ability to execute parts of the pipeline on different environments can lead to higher performance but also cheaper executions. This work shows the design and optimization process that led us to a state-of-the-art Variant Calling hybrid workflow based on the StreamFlow Workflow Management System (WfMS). We also compare StreamFlow with Snakemake, an established WfMS targeting HPC facilities, observing comparable performance on single environments and satisfactory improvements with a hybrid cloud-HPC configuration.},

howpublished = {47th IEEE Annual Computers, Software, and Applications Conference, COMPSAC 2023},

keywords = {across, icsc, streamflow},

pubstate = {published},

tppubtype = {misc}

}